Gene sequences

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SNP Detection
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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015790804.1_cds_XP_016503683.1_1626
CDS Infomation	[gene=LOC107821736] [db_xref=GeneID:107821736] [protein=protein TSS-like] [protein_id=XP_016503683.1] [location=join(52863..52926,53047..53108,53900..53992,54084..54156,54291..54638,54771..54838,54957..55088,55183..55224,55315..55839,55942..56099,56844..57363,57449..57511,57625..57726,58167..58484,59018..59110,59232..59333,59592..59696,59829..59962,61223..61406,62510..62641,63039..63151,63709..63796,64347..66521)] [gbkey=CDS]
Sequence	ATGGCACCAAACAAGAATGGTCGTGGCAAGACGAAGGGAGACAAGAAGAAGAAAGAAGAG AAGGTTCTTCCAGTTGTAATGGATATAATGATAAACCTTCCGGACGAGACTCAAGTTATT TTAAAGGGAATATCTACGGATAGAATTATCGATGTTCGTCGATTACTATCAGTGAACACA ACAACTTGTAATATCACCAATTTCTCCCTATCTCATGAGGTAAGAGGCCCACGTTTAAAA GATACAGTGGACGTTTCCGCACTGAAGCCCTGCCTCCTGAATCTTGTCGAAGAGGATTAC GATGAAGAAAGCGCCGCGGCGCACGTTAGAAGGCTGCTGGATATCGTCGCTTGTACGACG AGTTTTGGGCCGTCGGGAAGTAGTGGCAAAGAGTTGAAAAGTGAGACTAGCAAGAATGCG CGAGGCGCGCAGGATAACAAGAGCGCCAAAAAACCCAACAAGGCTCGGGCAAATGATAAG CTACCGTCGCCGCCGCAATCGCCGACGCCGACGCCGGCTCAGCAGCTGGGTAAAGATGCG GCGGCAGTGGACGTAGAGGGAGAGATGAGCAATACGTGCCCTAAGATTGGAAGCTTCTAT GAGTTCTTCTCGCTTTCTCATCTCACGCCCCCTCTTCAGTTCATAAGAAGGGCAACAAGA CAGCAAGATGATGAAGTTTTGCCAGATGGTCATCTTTTCTCTCTTGAAGTGAAACTTTGT AACGGAAAGCTGGTTATCATTGAAGCTTGCAGAAAAGGATTTTACAACTTTGGAAAGCAG GGAATTCTTTGTCACAATCTTGTTGATTTGTTGAGACAACTCAGTAGAGCATTTGACAAT GCTTACGATGATCTCATGAAAGCATTCTTAGAGCGTAATAAGTTTGGGAACCTTCCCTAC GGTTTCAGAGCCAACACATGGCTTATACCACCTGTGGGAGCACAGTTGCCATCTATCTTC CCACCTCTACCTGTGGAGGACGAAAAATGGGGAGCAAATGGAGGTGGTCTAGGCCGAGAT GGAAAATCTGATTTGTTACCTTATGCCAATGAATTTTTGAATGTTGCATCCATGCCTTGT AAGACAACAGAGGAGAGGCAGATCCGAGACAGGAAGGCTTTTCTTCTTCATAGTTTATTT GTTGATGTAGCCATTTTTCGAGCAATTTCAGCTGTAAAGCATGTCATGGAGAACGTCAAA CCAGCTCATTGTGATTCGAATGGAGAAATCATTTTTAATGAGACAGTTGGGGACTTGAGC GTGTTTGTTACCAAAGATGCTTCAAATGCTAGTTGCAAAATAGATACCAAAATTGATGGA TTTCAAGCAACTGGAATAGCTATGAAGAATCTGATGGAAAGAAATCTACTGAAGGGGATA ACTGCTGATGAAAATACTGCTGCCCATGATATTGCTACTTTAGGTGTTTTGAATGTAAGG CATTGTGGTTATATTGCAACTGTAAAAGTTCAAGGAAAAGAAAATGACAAAGTGGGCAAT CCACTGCAAAGCATGGAACTTCCTGATCAGCCTGATGGTGGTGCAAATGCCCTCAATATC AACAGTTTACGCTTGCTCCTTCACAAGAAAGTGGATAACAAGGTAGGGCATTCAAAACCT TCGGCAGCTGAAGAGATGACTTGCTATCAGGCATTTGTAAAGAGAATACTAGAAGAGAGT CTTACCAAGCTTGAAGAAGAGAAAATAGAAGGTGACTCTTTCATCAGATGGGAACTTGGT GCATGCTGGATACAACACTTACAAGATCAGAAGAAATCAGAGAAGGACAAAAAAAACCCA GTTGAGAAGACAAAAAATGAGATGAAAGTTGAGGGACTTGGAATACCTCTTAAGTCACTC AAGAACAAAAAGAAGAACATAGATGGGGCTAACATGGAATCCCAGCCTGAAAGCTTCAAA TGTGTCGCAAATGGTGTAGGAGGGGGATCAGAAAAAGGTGTCCCGCAGTCTGGGGAGTCT CAGTTTGAGAGTGATACGGATCAAAATCAGCTTGTACTCAAGACATTGTTGTCTGATGCT GGTTTTACAAGGTTAAAAGAGTCGGAGACTGGACTTCACCTTAAGTCTTTGGAAGAGCTG ATTGATCTGTCACAGAAGTATTACAATGAAGTTGCCCTTCCAAAGCTGGTTGCTGATTTT GGTTCTTTGGAACTCTCACCAGTAGATGGTCGAACTTTAACTGATTTCATGCATACCCGG GGTCTACGTATGCGTTCTCTTGGACAAGTAGTTAAACTTTCCGAGAAGTTATCACACGTT CAATCTCTTTGTATACACGAGATGATAGTCCGGGCCTTTAAACATATTTTGCAAGCAGTT ATTGCATCTGTTGTTGACATTGAGGATATGGCTGCGATACTTGCTGCTGCCTTGAATATG ATGCTTGGGGTACCTGAAAATGATGAATCAAATGAGTCTCACGGCGTTGATTCTTTGATC TGGAAATGGCTGGAACTATTTTTGAAGAAGCGATATGAATGGGATGTAGGGAGCCTAAAG TACAAAGATGTGAGGAAATTTGCAGTTCTTCGTGGTTTATGCCATAAGGTGGGAATTGAA CTGGTTCCAAGAGATTATGAAATGAGTTCCCCAAATCCTTTTCAGAAATTAGACATTGTC AGCCTAGTACCAGTGCATAAGCAAGCTGCTTGCTCTTCTGCAGATGGTAGGCAGCTTTTG GAATCATCCAAAACAGCTTTAGATAAGGGAAAACTTGAAGATGCTGTCAGCTATGGGACT AAGGCTCTTGCTAAGCTGGTTGCAGTATGTGGTCCATATCATCGAATGACAGCTGGAGCT TATAGCCTTCTAGCTGTTGTTCTGTATCACACCGGTGATTTTAATCAGGCCACAATCTAT CAGCAAAAGGCCTTGGACATAAATGAAAGAGAGTTGGGCCTCGATCACCCAGACACCATG AAAAGTTATGGTGATCTTGCAGTTTTCTATTACCGACTTCAACACACAGAGTTGGCTCTC AAGTATGTAAAACGAGCTCTTTATCTGTTGCATCTCACATGTGGCCCCTCACATCCAAAC ACTGCGGCGACATATATAAATGTGGCAATGATGGAGGAAGGGCTTGGTAATGTGCATGTT GCCCTCAGATATCTCCATAAAGCTTTGAAGTGTAACCAGAAGTTACTTGGTCCCGACCAT ATTCAGACAGCTGCAAGTTACCATGCTATAGCAATCGCACTCTCTTTGATGGAAGCTTAT CCTTTGAGTGTTCAGCATGAGCAAACAACCCTGCAGATACTCCGAGCAAAGCTTGGTCCA GATGATCTTCGCACTCAGGATGCTGCTGCATGGCTCGAGTATTTTGAGTCAAAGGCTTTT GAACAGCAAGAAGCTGCTCGGAACGGAACCAAGAAGCCTGATGCATCAATAGCCAGCAAG GGTCATTTGAGTGTGTCAGATTTGCTCGACTACATCAATCCAAGTCCTGATGCCAAAGGG AGAGATGTTGGATCAAAAAGAAAAGGTTTTGTCTCAAAGGCTTTTATTTCTCAGGTGAAG GGACAATCTGATCAAAGCAATGTTGCCTCACCAAACTCTGACACTCCTAAAGATGTCCTA AAAGAAGAGTCAGATGAGGAGAAACAAATTGTTGAAGATCATACTGATCCCAAGATGAAT TTGGAACCCGTTGACACAGTAGTTAAATCCCATCACAATGGAGATGAAGAAATTGCTGAG GACAAACCCGTTCATTTGGTGAAGGAAGCTTCAATTGAGAAGCCTGTTGTCCGTGAAGTC TTATCTGAACCTTCTGCTGAAGCAGAAGATGGATGGCAGTCAGTGCAGAGACCAAGGTCA GGTGGTTTCTATGGACGAAGACGAAGGCAGAGGCGGCAAACCATCAGCAAGGTCATTGGT TACCAGAAAAAGGACTCTGTTTCTGAGGTTGATTATGCTAAACTGAAGAATAACTATCAA GCTAGTAAATATTATGTCTTAAAGAAACGGACATCACCAGGAAGTTATGCAGATTATTAC ATAGCAAAAAATCAATCTCCTGGTACCAAACTTGGTCGAAGAGTCATAAAAGCTGTAACC TACCGTGTCAAGTCTGTGTCATCATCTGTCAGAGAGGCTGTTCCTGAGATCTCCACAACT GGAGGAGATTTGTTAGCTACTTCGTCAGAGCAGGTCCAAGTTTCTGCAACAAAAGAGGTT GTGTCACTACCAAAGAGAAGTTCGATTGTAAACCTAGGAAAATCTCCTTCCTATAAGGAA GTGGCACTCGCCCCGCCAGGTACCATCTCTATGTTGCAGGAGAGAGTTTCTGAAAATGAA GTTCCTGATAATCCAGACGTTCTAAAAGTTGGGGAGGAGAGCAATGGAGCAGAAGAAAAT TCTGAAACAATGAGAAGAGATGCAGAATCCATAAAGCAAGAGAACATTCAGGATCTTGTT GCAGATTCTGCTGATCAAGTACAAAATGAAACAGAAGATACTGACGATAAAGAAGAAATT CAACCGAGTGATCTCAAAGGTGGTGAAATTTCAGATGTGATATCTGCAAATGCATCTGTT CAACCCGGTCATGTTGATGTTAGTCCAATGGAACAGGGAAATGTCCAGACTCATAATGTT CCTGCTTCTGACGATTCTCCCGAAGTGGATTTCTGTGAAAAAGACTCATCAAGCAATTTG GATCCTAGCTGTATCTCGAGTTTGACCTTGCAAGACATGGATCATCTGAAGGTAACAGTT GCGTCATCTCTTACATGTGATGCAAGTCGAGAATTGTCGAGAAAGCTATCCGCATCAGCA GCACCATTCAGTCCCTCCCCAGCCATTGCCCGTGCAGCACCGTTACCTATGAACATTAAT CTTCCTTCTCCTCCTGGAACACTACCACCCGTTGGCCCTTGGTCAATGAACATCTCTCTT CATCAAGGACCACCAACTATGTTACCCAATCCAATGTGCTCCTCCCCTCATCACCTGTAC CCTTCACCCCCGCACACCCCAAACATGATGCACCCATTGCGCTTTATGTACCCTCCATAT TCTCAACCCCAGACGATACCTCCAAGTACGTTCCCGATGAGCAGCAGCAATTTCCATCCG AATCATTATGCTTGGCAATGCAATATAGCTCCTAATGCATCTGAGTACGTTCCTGCCACA GTTTGGCCTGGCTGCCACCCAGTCGAGTTTTCTATATCACCACCTGTGATTGAGCCTATA ACTGACTCAATTTCTGCTGCTAAGGAGCCATCTGATAACCCTGAAAGCATTATTTTGGCA ACAAGCTTACCAGTAGATCTTAACACTGGGGATGAAGTTAAGGAAGAAGTAAATCTTCCA GCATCAGATACGGGGGAGAGCTTAGCTGCGGTTGGATCAAAAGAGAGAGCAAGCAGCACT TCAGATTCACATTTTGTTACATTGTCCAGTAATCAATCAGAAGAGGGTAATGGATCAAAT GAGAATGCTGTGCAGAGAAATCCTACGGAGACTGATAAGGAGAAGACCTTCAACATTTTG GTACGGGGCCGGAGGAACCGCAAACAAACTCTAAGAATGCCGATTAGTTTGCTCAAGAGA CCATATTCCTCTCAGCCCTTCAAAGCTGTATATAGCAGGGTTATAAGAGAGACTGAGGTT CCCAGGTCTACCAGCTTTGATCCCCAGGAACATGGCATAGCGACTGCTACTTGA

Peptide Sequence

PEP ID	XP_016503683.1
PEP Infomation	PREDICTED: protein TSS-like [Nicotiana tabacum]
Sequence	MAPNKNGRGKTKGDKKKKEEKVLPVVMDIMINLPDETQVILKGISTDRIIDVRRLLSVNT TTCNITNFSLSHEVRGPRLKDTVDVSALKPCLLNLVEEDYDEESAAAHVRRLLDIVACTT SFGPSGSSGKELKSETSKNARGAQDNKSAKKPNKARANDKLPSPPQSPTPTPAQQLGKDA AAVDVEGEMSNTCPKIGSFYEFFSLSHLTPPLQFIRRATRQQDDEVLPDGHLFSLEVKLC NGKLVIIEACRKGFYNFGKQGILCHNLVDLLRQLSRAFDNAYDDLMKAFLERNKFGNLPY GFRANTWLIPPVGAQLPSIFPPLPVEDEKWGANGGGLGRDGKSDLLPYANEFLNVASMPC KTTEERQIRDRKAFLLHSLFVDVAIFRAISAVKHVMENVKPAHCDSNGEIIFNETVGDLS VFVTKDASNASCKIDTKIDGFQATGIAMKNLMERNLLKGITADENTAAHDIATLGVLNVR HCGYIATVKVQGKENDKVGNPLQSMELPDQPDGGANALNINSLRLLLHKKVDNKVGHSKP SAAEEMTCYQAFVKRILEESLTKLEEEKIEGDSFIRWELGACWIQHLQDQKKSEKDKKNP VEKTKNEMKVEGLGIPLKSLKNKKKNIDGANMESQPESFKCVANGVGGGSEKGVPQSGES QFESDTDQNQLVLKTLLSDAGFTRLKESETGLHLKSLEELIDLSQKYYNEVALPKLVADF GSLELSPVDGRTLTDFMHTRGLRMRSLGQVVKLSEKLSHVQSLCIHEMIVRAFKHILQAV IASVVDIEDMAAILAAALNMMLGVPENDESNESHGVDSLIWKWLELFLKKRYEWDVGSLK YKDVRKFAVLRGLCHKVGIELVPRDYEMSSPNPFQKLDIVSLVPVHKQAACSSADGRQLL ESSKTALDKGKLEDAVSYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIY QQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPN TAATYINVAMMEEGLGNVHVALRYLHKALKCNQKLLGPDHIQTAASYHAIAIALSLMEAY PLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTKKPDASIASK GHLSVSDLLDYINPSPDAKGRDVGSKRKGFVSKAFISQVKGQSDQSNVASPNSDTPKDVL KEESDEEKQIVEDHTDPKMNLEPVDTVVKSHHNGDEEIAEDKPVHLVKEASIEKPVVREV LSEPSAEAEDGWQSVQRPRSGGFYGRRRRQRRQTISKVIGYQKKDSVSEVDYAKLKNNYQ ASKYYVLKKRTSPGSYADYYIAKNQSPGTKLGRRVIKAVTYRVKSVSSSVREAVPEISTT GGDLLATSSEQVQVSATKEVVSLPKRSSIVNLGKSPSYKEVALAPPGTISMLQERVSENE VPDNPDVLKVGEESNGAEENSETMRRDAESIKQENIQDLVADSADQVQNETEDTDDKEEI QPSDLKGGEISDVISANASVQPGHVDVSPMEQGNVQTHNVPASDDSPEVDFCEKDSSSNL DPSCISSLTLQDMDHLKVTVASSLTCDASRELSRKLSASAAPFSPSPAIARAAPLPMNIN LPSPPGTLPPVGPWSMNISLHQGPPTMLPNPMCSSPHHLYPSPPHTPNMMHPLRFMYPPY SQPQTIPPSTFPMSSSNFHPNHYAWQCNIAPNASEYVPATVWPGCHPVEFSISPPVIEPI TDSISAAKEPSDNPESIILATSLPVDLNTGDEVKEEVNLPASDTGESLAAVGSKERASST SDSHFVTLSSNQSEEGNGSNENAVQRNPTETDKEKTFNILVRGRRNRKQTLRMPISLLKR PYSSQPFKAVYSRVIRETEVPRSTSFDPQEHGIATAT

Transcript Sequence

Gene sequence data has not been registered.